Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs6485964 | chr11:49166237 | C/T | 0 | 289 | 25.57 | 28.17 | 4.63 | KM Plot |
| KIRP | rs6498149 | chr16:8711175 | A/G | 5.97E-5 | 287 | 5.72 | 34.3 | 25.53 | KM Plot |
| KIRP | rs6498150 | chr16:8711223 | T/G | 5.97E-5 | 287 | 5.72 | 34.3 | 25.53 | KM Plot |
| KIRP | rs6498151 | chr16:8711258 | G/A | 5.97E-5 | 287 | 5.72 | 34.3 | 25.53 | KM Plot |
| KIRP | rs6498153 | chr16:8711290 | T/G | 5.97E-5 | 287 | 5.72 | 34.3 | 25.53 | KM Plot |
| KIRP | rs6498156 | chr16:8711668 | A/C | 5.97E-5 | 287 | 5.72 | 34.3 | 25.53 | KM Plot |
| KIRP | rs6498157 | chr16:8711726 | T/G | 5.97E-5 | 287 | 5.72 | 34.3 | 25.53 | KM Plot |
| KIRP | rs6498158 | chr16:8711731 | C/T | 5.97E-5 | 287 | 5.72 | 34.3 | 25.53 | KM Plot |
| KIRP | rs6498170 | chr16:8712576 | A/G | 5.97E-5 | 287 | 5.72 | 34.3 | 25.53 | KM Plot |
| KIRP | rs6498171 | chr16:8712663 | A/G | 5.9E-5 | 287 | 5.72 | 32.93 | 25.57 | KM Plot |
| KIRP | rs6498172 | chr16:8712699 | G/A | 5.9E-5 | 287 | 5.72 | 32.93 | 25.57 | KM Plot |
| KIRP | rs6498174 | chr16:8712983 | G/A | 5.9E-5 | 287 | 5.72 | 32.93 | 25.57 | KM Plot |
| KIRP | rs6498208 | chr16:8716041 | G/T | 5.14E-5 | 289 | 5.72 | 32.93 | 25.57 | KM Plot |
| KIRP | rs6498214 | chr16:8716107 | A/C | 5.14E-5 | 289 | 5.72 | 32.93 | 25.57 | KM Plot |
| KIRP | rs6498221 | chr16:8716498 | A/G | 6.12E-5 | 287 | 5.72 | 32.93 | 25.57 | KM Plot |